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Aleksandr Prystupa
Bioinformatics Programmer @Mount Sinai Health System
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WORK HISTORY
Bioinformatics Programmer @Mount Sinai Health System
Shruti Naik Lab- Primary bioinformatician on multiple projects in the Naik lab, analyzing Bulk RNA Sequencing, Single Cell RNA Sequencing, Spatial Transcriptomics, ATAC-Seq & Single Cell Multiome Data- Specialized in analyzing single-cell RNA-seq and Spatial Transcriptomics for skin diseases such as Psoriasis, Atopic Dermatitis, and Dermatomyositis- Analyzed a wide range of diseases in various contexts such as Psoriasis, Perianal Fistula in Chron’s Disease, IBD and neuroinflammatory memory in human and mouse datasets, as well as regeneration in Lungfish- Automated the development of pipelines for Single Cell RNA-Seq, Bulk RNA-Seq deconvolution, and Spatial Transcriptomics analysis- Developed R-Shiny app for biologists to create custom heatmaps for Bulk RNA Sequencing- Developed bs4Dash app allowing users to upload processed Seurat objects and chat with them to develop hypotheses and generate plots and analysis spreadsheets with no code- Fourth author and secondary bioinformatician on Science Immunology Spatial Transcriptomics based Psoriasis paper- Second author and lead bioinformatician on Immunity paper implicating HIF1A as a primary driver of psoriatic inflammation
EDUCATION
Northeastern University
Bachelor of Science - BS
Northeastern University
Master's degree
ABOUT ALEKSANDR PRYSTUPA
I am a bioinformatics analyst who is passionate about Omics analysis of any kind, with a…
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