Nathan Knapp
Senior Software Engineer | Distributed Systems & Scientific Computing | Python, C++, R | HPC & Cloud Infrastructure
- Role
- Informatics Developer Ii at Gate Bioscience
- Location
- Santa Fe, NM, US
- LinkedIn followers
- 500 followers
About Nathan Knapp
I build large-scale computational infrastructure for science — distributed pipelines, core C++ toolkits, and production systems across cloud and HPC environments. 7+ years spanning drug discovery, defense, CFD simulation, and earth science. Python, C++, R on AWS and HPC clusters.M.S. Computational Science & Engineering, TU Munich. B.S. Chemical Engineering, Yale. Based in Santa Fe.
Experience
Informatics Developer Ii
Jun 2024 — Present · Brisbane, CA, US
Architected computational pipelines in Python and R using Nextflow on AWS/Docker infrastructure- Developed web applications (R Shiny frontend, R/Python/AWS backend) enabling scientists to process and analyze assay data- Designed and refactored PostgreSQL database schema; built data ingest pipelines from external APIs
Education
Yale University
Bachelor of Science, Chemical Engineering (ABET-accredited)
2010 — 2014
Technical University of Munich
Master of Science, Computational Science and Engineering
2014 — 2017
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