Jack Freeman
Computational Biologist at Morgridge Institute for Research
- Role
- Computational Biologist at Morgridge Institute for Research
- Location
- Madison, WI, US
- LinkedIn followers
- 500 followers
About Jack Freeman
Computational Biologist at The Morgridge Institute for Research. Focused on…
Experience
Computational Biologist
Morgridge Institute for Research
Sep 2022 — Present · Madison, WI, US
Develop, implement, and optimize bioinformatics pipelines for single-cell RNA sequencing (scRNA-seq) and Assay for Transposase-Accessible Chromatin using sequencing (ATAC-seq)- Perform core and downstream analysis of scRNA-seq and ATAC-seq data, including quality control, normalization, clustering, differential expression analysis, and integration of datasets- Utilize and adapt large language models (LLMs) for the classification and analysis of biomedical texts, enhancing data interpretation and knowledge extraction- Collaborate with interdisciplinary teams to design experiments, interpret results, and contribute to high-impact publications- Stay abreast of latest developments in bioinformatics, computational biology, and related fields, continuously integrating novel methods and technologies into our research- Provide expertise and support in bioinformatics to team members, contributing to the overall scientific goals of the organization- Ensure rigorous documentation of methods and analyses, maintaining high standards of reproducibility and transparency.
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