Deepak Bhayal

About Deepak Bhayal

As a Bioinformatics Engineer, 4+ years of experienced associate with a demonstrated history of working in the bioinformatics industry. Strong research professional with skilled in Next Generation Sequencing, Programming to solve Biological phenomenon.> Developed automated pipeline for WE[G]S using python.> Developed automated workflow for RNA-Seq using Nextflow.> R, AWS EC2, Docker, nfcore, nextflow, snakemake.Skilles:• Programming: R, Bash, Python• workflows: Nextflow, snakemake.• container: Docker • Statistical test : Chi-square, T test, Z test, ANNOVA etc• Mathamatical models.• NGS tools: FastQC, fastp, trimmomatic, Trimgalore, Multiqc, BWA, Bowtie2, STAR Aligner, Velvet, Prokka, SPAdes, Samtools, bamtools, BCFtools, vcftools, Picard tools, GATK, Qualimap, vcfstats, VEP, IGV, Annovar, PLINK, Freebyes.• Databases: gnomad, clinvar, COSMIC, dbSNP, dbNSFP, omim, drugbank, pubmed, tcga etc.• Bioinformatics Tools: Standalone BLAST, Clustal Omega, GenBank, UCSC Genome Browser, TCGA, Cytoscape, AutoDock.NGS Applications:• Metagenome: Mathur, QIIME2, DADA2, phyloseq.• Whole Genome: FastQC, trimgalore, BWA, GATK, ANNOVAR.• Whole Exome• RNA-Seq: FASTp, STAR, Qualimap, featurerCount, DESeq, EdgeR, pathway enrichment.• Targeted sequencing• Panels data analysis

Experience

1. Senior Bioinformatician

   Hyperbeans Inc

   Sep 2025 — Present · Indore, IN

Education

• School of Biotechnology, Devi Ahilya University, Indore

  Master's degree, Bioinformatics

  2017 — 2019

• Govt. Holkar Science College A.B. Road, Indore

  Bachelor's degree, Biotechnology

  2014 — 2017

• Govt Boys Higher secondary school, Piplya Buzurg, Khargone, India

  10th, Science, Mathematics, Social Science, English, Hindi, Sanskrit

  2011 — 2012

• Swami Vivekanand Higher secondary school, Punjapura, Dewas, India

  Intermediate, Biology, Chemistry, Physics

  2013 — 2014